Bio::Ontology::RelationshipFactory - Instantiates a new
Bio::Ontology::RelationshipI (or derived class) through a factory
use Bio::Ontology::RelationshipFactory;
# the default type is Bio::Ontology::Relationship
my $factory = Bio::Ontology::RelationshipFactory->new(
-type => 'Bio::Ontology::GOterm');
my $clu = $factory->create_object(-name => 'peroxisome',
-ontology => 'Gene Ontology',
-identifier => 'GO:0005777');
This object will build Bio::Ontology::RelationshipI objects generically.
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rather than to the module maintainer directly. Many experienced and reponsive
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include a thorough description of the problem with code and data examples if
at all possible.
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The rest of the documentation details each of the object methods. Internal
methods are usually preceded with a _
Title : new
Usage : my $obj = Bio::Ontology::RelationshipFactory->new();
Function: Builds a new Bio::Ontology::RelationshipFactory object
Returns : Bio::Ontology::RelationshipFactory
Args : -type => string, name of a Bio::Ontology::RelationshipI
derived class.
The default is Bio::Ontology::Relationship.
See Bio::Ontology::Relationship, Bio::Ontology::RelationshipI.