Copyright [2015-2018] EMBL-European Bioinformatics Institute
Licensed under the Apache License, Version 2.0 (the "License"); you
may not use this file except in compliance with the License. You may obtain a
copy of the License at
http://www.apache.org/licenses/LICENSE-2.0
Unless required by applicable law or agreed to in writing, software distributed
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WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the
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the License.
Bio::DB::HTS::Target -- Object representing the query portion of a BAM/SAM
alignment in NATIVE alignment
This is identical to Bio::DB::HTS::Query, except that the dna, qscores and start
and end positions are all given in the orientation in which the read was
sequenced, not in the oreintation in which it was aligned.
Rishi Nag <
[email protected]<gt>