Bio::Graphics::Browser2::PluginSet -- A set of plugins
None. Used internally by gbrowse & gbrowse_img.
- $plugin_set =
Bio::Graphics::Browser2::PluginSet->new($config,$state,@search_path)
- Initialize plugins according to the configuration, page
settings and the plugin search path. Returns an object.
- $plugin_set->configure($database)
- Configure the plugins given the database.
- $plugin_set->annotate($segment,$feature_files,$rel2abs)
- Run plugin annotations on the $segment, adding the
resulting feature files to the hash ref in $feature_files
({track_name=>$feature_list}). The $rel2abs argument holds a coordinate
mapper callback, but is currently unused.
Bio::Graphics::Browser
Lincoln Stein <
[email protected]>.
Copyright (c) 2005 Cold Spring Harbor Laboratory
This package and its accompanying libraries is free software; you can
redistribute it and/or modify it under the terms of the GPL (either version 1,
or at your option, any later version) or the Artistic License 2.0. Refer to
LICENSE for the full license text. In addition, please see DISCLAIMER.txt for
disclaimers of warranty.