Bio::Roary::CombinedProteome

NAME

Bio::Roary::CombinedProteome - Take in multiple FASTA sequences containing proteomes and concat them together and output a FASTA file, filtering out more than 5% X's

VERSION

version 3.13.0

SYNOPSIS

Take in multiple FASTA sequences containing proteomes and concat them together and output a FASTA file, filtering out more than 5% X's
use Bio::Roary::CombinedProteome;

   my $obj = Bio::Roary::CombinedProteome->new(
     proteome_files   => ['abc.fa','efg.fa'],
     output_filename   => 'example_output.fa',
     maximum_percentage_of_unknowns => 5.0,
   );
   $obj->create_combined_proteome_file;

AUTHOR

Andrew J. Page <[email protected]>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute. This is free software, licensed under:

  The GNU General Public License, Version 3, June 2007