R_mds - project distance matrix into lower number of dimensions
R_mds -k <filtered_kmers.txt> -p <pheno_file>
Projects distance matrix into lower number of dimensions Requires R and rhdf5 to
be installed, see github wiki for more details
-
-d, --dist
- Distance matrix output by kmds
-
-p, --pheno
- Phenotype file used by seer
-
-o, --output
- Output prefix (default 'all_structure')
- --pc
- Number of dimensions to project into (default 3)
- -R
- R executable (default 'which R')
-
-h, --help
- Displays this message
This manpage was written by Andreas Tille for the Debian distribution and can be
used for any other usage of the program.