ace2sam - ace to sam converter
ace2sam [
-pc]
<in.ace>
- -p
- output padded SAM
- -c
- write the contig sequence in SAM
- Notes:
- 1. Fields must appear in the following order:
(CO->[BQ]->(AF)->(RD->QA))
- 2. The order of reads in AF and in RD must be
identical
- 3. Except in BQ, words and numbers must be separated by a
single SPACE or TAB
- 4. This program writes the headerless SAM to stdout and
header to stderr
This manpage was written by Andreas Tille for the Debian distribution and can be
used for any other usage of the program.