archive-pmc - maintain a local NCBI PubMed Central archive
archive-pmc [[
-]
daily|[
-][
re]
index]
[[
-]
clean|[
-]
clear|[
-]
scrub] [[
-]
zap] [[
-path]
dir [[
-temp|
-work[
ing]]
dir]]
archive-pmc prepares a directory to hold a local PubMed Central archive,
then downloads a full database dump from NCBI's servers, organizes the dump
into an
rchive(1) trie, and refreshes the versioned records.
- [-]daily
- Additionally produce or update an inverted index.
- [-][re]index
- Fully reindex, complete with an inverted index.
- [-]clean|[-]clear
- Delete Indices contents and Increment
files.
- [-]scrub
- Delete Indices contents, Increment files, and
Postings directories.
- [-]zap
- Delete entire archive.
- [-path] dir
- Place the local archive in dir.
- [-temp|-work[ing]] dir
- Place intermediate subtrees in dir.
- EDIRECT_PMC_MASTER
- Local archive directory to use in the absence of
-path. Expected to hold an absolute path; mandatory when not
supplying a path on the command line.
- EDIRECT_PMC_WORKING
- Directory to hold intermediate subtrees in the absence of
-temp|-work[ing]. Expected to hold an absolute path.
Defaults to the primary local archive directory when not set.
archive-pubmed(1),
download-pmc(1),
fetch-pmc(1),
rchive(1),
xtract(1).