average_genome_size - Calculate the average genome size (in bp) of species in a
Grinder library
Calculate the average genome size (in bp) of species in a Grinder library given
the library composition and the full-genomes used to produce it.
- <db_fasta>
- FASTA file containing the full-genomes used to produce the
Grinder library.
- <rank_file>
- Grinder rank file that describes the library
composition.
Copyright 2009-2012 Florent ANGLY <
[email protected]>
Grinder is free software: you can redistribute it and/or modify it under the
terms of the GNU General Public License (GPL) as published by the Free
Software Foundation, either version 3 of the License, or (at your option) any
later version. Grinder is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
details. You should have received a copy of the GNU General Public License
along with Grinder. If not, see <
http://www.gnu.org/licenses/>.
All complex software has bugs lurking in it, and this program is no exception.
If you find a bug, please report it on the SourceForge Tracker for Grinder:
<
http://sourceforge.net/tracker/?group_id=244196&atid=1124737>
Bug reports, suggestions and patches are welcome. Grinder's code is developed on
Sourceforge (<
http://sourceforge.net/scm/?type=git&group_id=244196>)
and is under Git revision control. To get started with a patch, do:
git clone git://biogrinder.git.sourceforge.net/gitroot/biogrinder/biogrinder