NAME

bamcleanheader.py - remove illegal and malformed fields from a BAM file's header

SYNOPSIS

bamcleanheader.py [-h] [-S] [input [input ...]]

DESCRIPTION

remove illegal and malformed fields from a BAM file's header

OPTIONS

positional arguments:

input
SAM/BAM file to inject header lines into. If '-' or absent then defaults to stdin.

optional arguments:

-h, --help
show this help message and exit
-S, --is_sam
input is SAM

AUTHOR


This manpage was written by Andreas Tille for the Debian distribution and
can be used for any other usage of the program.

Questions & Answers

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