bamindex - create index for BAM file
bamindex [options]
bamindex reads a BAM file from standard input and produces a BAM index (.bai)
file for this BAM file on standard output.
verbose=<1>: Valid values are
- 1:
- print progress report on standard error
- 0:
- do not print progress report
tmpfile=<filename>: set the prefix for temporary file names. By
default temporary files are created in the current directory.
Written by German Tischler.
Report bugs to <
[email protected]>
Copyright © 2009-2013 German Tischler, © 2011-2013 Genome Research
Limited. License GPLv3+: GNU GPL version 3
<
http://gnu.org/licenses/gpl.html>
This is free software: you are free to change and redistribute it. There is NO
WARRANTY, to the extent permitted by law.