NAME

blst2tkns - tokenize XML-formatted magicblast output

SYNOPSIS

blst2tkns

DESCRIPTION

blst2tkns reads XML-formatted magicblast output from standard input and summarizes details on standard output in a tab-delimited two-column key/value table.
 
NB: At the time of this writing, magicblast cannot produce suitable XML output itself; instead, you can request ASN.1 output via -outfmt asn and pipe the result through transmute -a2x.

SEE ALSO

split-at-intron(1), transmute(1).

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