NAME

bppalnscore - Bio++ alignment scoring
 

SYNOPSIS

bppalnscore [options]
 

AVAILABILITY

All UNIX flavors
 

DESCRIPTION

bppalnscore compares two alignment and compute corresponding column scores. Scores can be output to a text file, and/or used to generate a site selection to be output as a Mase file.
 

OPTIONS

You should refer to 'info bppsuite' or to the online manual of bppsuite for a complete list of available options.
 
--noninteractive
generates output for redirection in a file.
param=file
reads a file for loading options

AUTHOR

Bio++ Development Team.