insdseqget - format sequences from GenBank as an XML INSDSet
insdseqget [
-] [
-d filename] [
-i filename] [
-m n/p/b] [
-n] [
-o filename] [
-v]
insdseqget retrieves biological sequence data from GenBank (according to
an input list of GI accession numbers) and prints it out as an XML INSDSet
document.
A summary of options is included below.
- -
- Print usage message
-
-d filename
- Input file name for date list (desired accessions, one per
line, followed by a blank line and a list of allowed dates, also one per
line)
-
-i filename
- Input file name for GI list (default = stdin)
-
-m n/p/b
- Molecule type:
- n
- Nucleotide (default)
- p
- Protein
- b
- Both
- -n
- Return only new records (for which the given GI refers to
an old version)
-
-o filename
- Output file name for the XML INSDSet (default =
stdout)
- -v
- Fetch SNP Variations
The National Center for Biotechnology Information.
asn2gb(1),
gbseqget(1).