Section 1 of the manual describes user commands and tools, for example, file manipulation tools, shells, compilers, web browsers, file and image viewers and editors, and so on.
Page 1
- 0desktop
- add programs to the desktop environment
- 0install
- a decentralised software installation system
- 0launch
- download and run programs by URL
- 0store-secure-add
- add an implementation to the system cache
- 0store
- manage the implementation cache
- 0xFFFF
- Open Free Fiasco Firmware Flasher, version 0.9
- 2csv
- xml2 - convert xml documents in a flat format 2xml - convert flat format into xml html2 - convert html documents in a flat format 2html - convert flat format into html csv2 - convert csv files in a flat format 2csv - convert flat format into csv
- 2d-slam-demo
- A didactical GUI application to learn how 2D SLAM works
- 2ff
- convert image to farbfeld
- 2ft
- 2-frame translation of a DNA sequence into protein
- 2html
- xml2 - convert xml documents in a flat format 2xml - convert flat format into xml html2 - convert html documents in a flat format 2html - convert flat format into html csv2 - convert csv files in a flat format 2csv - convert flat format into csv
- 2ndscore
- find the best hairpin anchored at each position
- 2ping
- A bi-directional ping utility
- 2ping6
- 2ping - A bi-directional ping utility
- 2to3
- 3.3 - Python2 to Python3 converter
- 2vcard
- convert addressbooks to VCARD format
- 2xml
- xml2 - convert xml documents in a flat format 2xml - convert flat format into xml html2 - convert html documents in a flat format 2html - convert flat format into html csv2 - convert csv files in a flat format 2csv - convert flat format into csv
- 3d-rotation-converter
- A GUI tool to visualize SO(3) rotations
- 3depict
- 3Depict - 3D scalar point cloud visualization and analysis
- 3dsdump
- Displays information about the internal structure of a 3DS file
- 411toppm
- convert Sony Mavica .411 image to PPM
- 4Pane
- a detailed-view quad-pane file manager for GTK+
- 4g8
- Packet Capture and Interception for Switched Networks
- 4pane
- 4Pane - a detailed-view quad-pane file manager for GTK+
- 4ti2-circuits
- 4ti2 - software package for algebraic, geometric and combinatorial problems on linear spaces
- 4ti2-genmodel
- 4ti2 - software package for algebraic, geometric and combinatorial problems on linear spaces
- 4ti2-gensymm
- 4ti2 - software package for algebraic, geometric and combinatorial problems on linear spaces
- 4ti2-graver
- 4ti2 - software package for algebraic, geometric and combinatorial problems on linear spaces
- 4ti2-groebner
- 4ti2 - software package for algebraic, geometric and combinatorial problems on linear spaces
- 4ti2-hilbert
- 4ti2 - software package for algebraic, geometric and combinatorial problems on linear spaces
- 4ti2-markov
- 4ti2 - software package for algebraic, geometric and combinatorial problems on linear spaces
- 4ti2-minimize
- 4ti2 - software package for algebraic, geometric and combinatorial problems on linear spaces
- 4ti2-normalform
- 4ti2 - software package for algebraic, geometric and combinatorial problems on linear spaces
- 4ti2-output
- 4ti2 - software package for algebraic, geometric and combinatorial problems on linear spaces
- 4ti2-ppi
- 4ti2 - software package for algebraic, geometric and combinatorial problems on linear spaces
- 4ti2-qsolve
- 4ti2 - software package for algebraic, geometric and combinatorial problems on linear spaces
- 4ti2-rays
- 4ti2 - software package for algebraic, geometric and combinatorial problems on linear spaces
- 4ti2-walk
- 4ti2 - software package for algebraic, geometric and combinatorial problems on linear spaces
- 4ti2-zbasis
- 4ti2 - software package for algebraic, geometric and combinatorial problems on linear spaces
- 4ti2-zsolve
- 4ti2 - software package for algebraic, geometric and combinatorial problems on linear spaces
- 4ti2
- software package for algebraic, geometric and combinatorial problems on linear spaces
- 5axisgui
- Vismach Virtual Machine GUI
- 5tt2gmwmi
- MRtrix3 - diffusion-weighted MRI white matter tractography
- 5tt2vis
- MRtrix3 - diffusion-weighted MRI white matter tractography
- 5ttcheck
- MRtrix3 - diffusion-weighted MRI white matter tractography
- 5ttedit
- MRtrix3 - diffusion-weighted MRI white matter tractography
- 5ttgen
- MRtrix3 - diffusion-weighted MRI white matter tractography
- 64tass
- A multi pass optimizing macro assembler for the 65xx series of processors
- 6ft
- 6-frame translation of a DNA sequence into protein
- 6tunnel
- tunnelling for application that don't speak IPv6
- 7z
- A file archiver with high compression ratio format
- 7za
- A file archiver with high compression ratio format
- 7zr
- A file archiver with high compression ratio format
- 7zz
- 7-Zip file archiver with a high compression ratio
- 9bind
- 9mount, 9bind, 9umount - mount/unmount 9p filesystems
- 9menu
- create a menu to run commands
- 9mount
- 9mount, 9bind, 9umount - mount/unmount 9p filesystems
- 9umount
- 9mount, 9bind, 9umount - mount/unmount 9p filesystems
- 9wm
- rio-like Window Manager for X
- ABYSS
- assemble short reads into contigs
- AClock
- Analog dockapp clock for GNUstep
- ASDatabase
- ASDatabase - defines how windows should be treated by AfterStep depending on its name
- ASDatabaseEntry
- ASDatabaseEntry - to be used in entry of AfterStep database
- ASFileBrowser
- AfterStep module for browsing files
- ASMount
- AfterStep module for mounting drives
- ASRun
- AfterStep module for choosing and manipulating windows based on patterns
- ASWallpaper
- AfterStep module for managing AfterStep wallpapers
- ATR_analysis
- analyse a smart card ATR
- AXIOMsys
- axiom - A general purpose computer algebra system
- AccurateMassSearch
- topp - library for LC/MS data management and analysis - tools
- AdapterRemoval
- Fast short-read adapter trimming and processing
- AddressManager
- Personal address manager for GNUstep
- AdunCore
- core module of the Adun molecular simulator
- AdunServer
- server for the Adun molecular simulator
- Affiche
- an application to "stick" little notes on the desktop
- AfterStep
- AfterStep - X11 window manager
- Align
- Align - Afterstep Align
- AlignRecords.py
- Repertoire clonal assignment toolkit (Python 3)
- AlignSets.py
- Multiple aligns input sequences by group
- Almighty
- OAR server daemon
- AnalyseDists
- Analyse a distance matrix
- AnalyseSeqs
- Analyse a set of sequences of common length
- Animate
- Animate - AfterStep module animating windows being iconified/deiconified
- AnimateTypes
- AnimateTypes - animation modes used in the Animate module's config
- AppCSXCAD
- GUI for looking at geometries for openEMS
- Arrange
- Arrange - AfterStep module for arranging windows in a tiling or cascading order
- AssayGeneratorMetabo
- topp - library for LC/MS data management and analysis - tools
- AssemblePairs.py
- Assembles paired-end reads into a single sequence
- AssignGenes.py
- Repertoire clonal assignment toolkit (Python 3)
- AudMeS
- AUDMES - AUDio MEasurement System
- AusweisApp2
- Official authentication app for German ID cards and residence permits
- AutoExec
- AutoExec - functions to be executed by AfterStep on startup/shutdown
- AutoSearch
- - a web-search tracking application
- BALLView
- A free molecular modeling and molecular graphics tool
- BRP_PACU
- brp-pacu - dual fft live audio analysis program
- BaitFilter
- v1.0.6 - manual page for BaitFilter-v1.0.6
- BaitFisher
- Error: - manual page for Error: Parameter file "--version" could not be opened. I guess it does not exist
- BalloonContents
- BalloonContents - Afterstep BalloonContents
- BambooTracker
- YM2608 (OPNA) tracker
- Bandage
- Bioinformatics Application for Navigating De novo Assembly Graphs Easily